PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN24778.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

HSF

Protein Properties

Length: 351aa MW: 40797.1 Da PI: 4.8266

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN24778.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	110	1.7e-34	50	141	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl k+y++++d ++++sws+ g sfvv+d++ f++++Lp+yFkh+nf+SF+RQLn+YgF+k++ e+ weF+++sF +g+k+ll++ik PIN24778.1 50 FLIKTYDMVDDLMSDSMVSWSRGGCSFVVWDSHAFSTTLLPRYFKHNNFSSFIRQLNTYGFRKIDPEK---------WEFANDSFLRGQKHLLRNIK 137 9**************************************************************999.........**************** PP XXXX CS HSF_DNA-bind 99 rkks 102 rkk PIN24778.1 138 RKKA 141 86 PP

Sequence ? help Back to Top
Protein Sequence Length: 351 aa Download sequence
MNPIFPVKEE YPAGEPSSSS LWQRQSEPPE YEAAPPRPME GLHEVGPPPF LIKTYDMVDD 60 LMSDSMVSWS RGGCSFVVWD SHAFSTTLLP RYFKHNNFSS FIRQLNTYGF RKIDPEKWEF 120 ANDSFLRGQK HLLRNIKRKK APNQLIPPLQ VNDPYVELGS YGQESEVGCL RRDKQVLTME 180 LIQLRQQQQG TRTYLQHMEV KLRKTEKRQQ QMMRFLAKLM QNPDFIRKLV LENERKGEIE 240 EDMSKKRRRP IEAGESSGFK VEPLDFGNHR YGYEVSELEA LALEIQGIGR AKGEIEEVEG 300 LSSDRELDEV FWEDLLKEEL DEEDVKDAEE REEEDVSLLV DKLGFLGSSS K

Sequence ? help Back to Top

Protein Sequence Length: 351 aa Download sequence

MNPIFPVKEE YPAGEPSSSS LWQRQSEPPE YEAAPPRPME GLHEVGPPPF LIKTYDMVDD  60
LMSDSMVSWS RGGCSFVVWD SHAFSTTLLP RYFKHNNFSS FIRQLNTYGF RKIDPEKWEF  120
ANDSFLRGQK HLLRNIKRKK APNQLIPPLQ VNDPYVELGS YGQESEVGCL RRDKQVLTME  180
LIQLRQQQQG TRTYLQHMEV KLRKTEKRQQ QMMRFLAKLM QNPDFIRKLV LENERKGEIE  240
EDMSKKRRRP IEAGESSGFK VEPLDFGNHR YGYEVSELEA LALEIQGIGR AKGEIEEVEG  300
LSSDRELDEV FWEDLLKEEL DEEDVKDAEE REEEDVSLLV DKLGFLGSSS K

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22830.1	1e-90	HSF family protein