PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN24820.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

WRKY

Protein Properties

Length: 439aa MW: 47447 Da PI: 5.0307

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN24820.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	97.8	7e-31	210	268	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+vers++dp++++itY++eHnh+ PIN24820.1 210 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCSARKQVERSRTDPNMLVITYTSEHNHP 268 699**********************998**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 439 aa Download sequence
MCSNFLKSMD NYQGDLADIV RASGGSIDGG YTAATASVPV PDWRFSSNPI NYSSDPSEDF 60 GDPFTYMRDP LIQNMDTPVS GFFNNSNIVN NSTVDDEMKR PSNIFSRMLQ ISPNGKLPVP 120 PCDHSQAAAA AAVAASPTGL KGSPVLIPNN HSLISPSSSK GCLVESSAGL QISSPRNTGI 180 KRRKTQAKKV VCIPAPAPAN SRASGEVVPS DLWAWRKYGQ KPIKGSPYPR GYYRCSSSKG 240 CSARKQVERS RTDPNMLVIT YTSEHNHPWP TQRNALAGST RSQPSKTTNN TSKTSPNSQA 300 QKPTNPKEEK NEISTENAVT SSSTNSAAVK EETDQDFDNQ LENMDDAEFN EGFPQTYKPT 360 LPDSNHTEDN FFADLGEIEG DPLDLLFIQG FSGDVGRENK DLDPFSFYDW AANTSNITSA 420 ATTTTTASSA ASYGDATRD

Sequence ? help Back to Top

Protein Sequence Length: 439 aa Download sequence

MCSNFLKSMD NYQGDLADIV RASGGSIDGG YTAATASVPV PDWRFSSNPI NYSSDPSEDF  60
GDPFTYMRDP LIQNMDTPVS GFFNNSNIVN NSTVDDEMKR PSNIFSRMLQ ISPNGKLPVP  120
PCDHSQAAAA AAVAASPTGL KGSPVLIPNN HSLISPSSSK GCLVESSAGL QISSPRNTGI  180
KRRKTQAKKV VCIPAPAPAN SRASGEVVPS DLWAWRKYGQ KPIKGSPYPR GYYRCSSSKG  240
CSARKQVERS RTDPNMLVIT YTSEHNHPWP TQRNALAGST RSQPSKTTNN TSKTSPNSQA  300
QKPTNPKEEK NEISTENAVT SSSTNSAAVK EETDQDFDNQ LENMDDAEFN EGFPQTYKPT  360
LPDSNHTEDN FFADLGEIEG DPLDLLFIQG FSGDVGRENK DLDPFSFYDW AANTSNITSA  420
ATTTTTASSA ASYGDATRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G30650.1	1e-94	WRKY family protein