PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN24823.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

WRKY

Protein Properties

Length: 313aa MW: 35311.5 Da PI: 7.0778

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN24823.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	70.6	2.2e-22	119	178	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST..T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa..gCpvkkkversaedpkvveitYegeHnhe 59 +Dg +WrKYGqK++ +se+pr Y+rCt++ gC+++k+v+r + +p + +tY ++H+++ PIN24823.1 119 EDGRTWRKYGQKDILNSEYPRCYFRCTHKpeGCKATKQVQRMKGNPILYRTTYFNHHTCK 178 89************************999*************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 313 aa Download sequence
MGSNGENVHA KTTRLMVELV KGKEFATQLQ NLLHKPVEEH GPLLAEELAL QILRSFTETL 60 SVLSSCTGSS AQISAVDGGG SGGGSACSGE TKKKVKDRRG CYKRRRTSDT WERVSSTMED 120 GRTWRKYGQK DILNSEYPRC YFRCTHKPEG CKATKQVQRM KGNPILYRTT YFNHHTCKQA 180 QSYLPHLIIH SDPPEPNLIS FQDNNNNNNI PSKQDDRNSQ KPAINISPVV KQEDTQSDIQ 240 DLSDAKPTLP WQEIIGPETI GYKPEWAPMR SSYQEEVVSG FHSCESTSLH GLDMEVNQLG 300 DIDNLHYFDD KMY

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	92	106	KKKVKDRRGCYKRRR
2	103	130	KRRRTSDTWERVSSTMEDGRTWRKYGQK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56400.1	1e-38	WRKY family protein