PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN24832.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

MYB_related

Protein Properties

Length: 344aa MW: 38407.4 Da PI: 7.2376

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN24832.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	20.2	1.3e-06	37	83	1	53
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkY 53 k+r rWt+e H++Fvea++ G + ++i e+++ k t +++SH Qk+ PIN24832.1 37 KQRERWTEEEHQKFVEALKLYGRA----WRQIEEHVGTK--TAIQIRSHAQKF 83 79****************998533....48999998877..888999999998 PP
2	Myb_DNA-binding	52.6	1.1e-16	39	83	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r rWT+eE++++v+a k++G W+ I +++g ++t+ q++s+ qk+ PIN24832.1 39 RERWTEEEHQKFVEALKLYGRA-WRQIEEHVG-TKTAIQIRSHAQKF 83 78****************88.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 344 aa Download sequence
MVAEARDQIV ATGQKASVQP DGNGYTPKVR KPYTITKQRE RWTEEEHQKF VEALKLYGRA 60 WRQIEEHVGT KTAIQIRSHA QKFFAKVTRD SNVDAEGSLN PIEIPPPRPK KKPLHPYPRK 120 LVDSANAEIM VSPDDVSVPE RDNLSPSSVL SAIGSDSLKS TAMEMHKSCL SPVSCATDSR 180 SAYSLFTERD NDHATFDISV KEEIGFHLTM KTTFGPRPGD KCITKFELFP LEVECPKDSA 240 HAEEAYTSIK LFGKTVVVRD TGELSLEAEE NNCQSLTPHI SDELTSKGSL SNNDVFEPKG 300 AFNVGRKVYT RGFLPYKRCL AEKDGISLIS FLQEREGQRA RVCS

Sequence ? help Back to Top

Protein Sequence Length: 344 aa Download sequence

MVAEARDQIV ATGQKASVQP DGNGYTPKVR KPYTITKQRE RWTEEEHQKF VEALKLYGRA  60
WRQIEEHVGT KTAIQIRSHA QKFFAKVTRD SNVDAEGSLN PIEIPPPRPK KKPLHPYPRK  120
LVDSANAEIM VSPDDVSVPE RDNLSPSSVL SAIGSDSLKS TAMEMHKSCL SPVSCATDSR  180
SAYSLFTERD NDHATFDISV KEEIGFHLTM KTTFGPRPGD KCITKFELFP LEVECPKDSA  240
HAEEAYTSIK LFGKTVVVRD TGELSLEAEE NNCQSLTPHI SDELTSKGSL SNNDVFEPKG  300
AFNVGRKVYT RGFLPYKRCL AEKDGISLIS FLQEREGQRA RVCS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G17300.1	2e-50	MYB_related family protein