PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN24861.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family MYB_related
Protein Properties Length: 143aa    MW: 15823.3 Da    PI: 5.2601
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN24861.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding57.14.1e-184388147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     +g+W+++Ed +l ++v  +G ++W++Iar ++ gR++k+c++rw + 
       PIN24861.1 43 KGPWSPDEDAKLSQLVSNFGARNWSLIARGIP-GRSGKSCRLRWCNQ 88
                     79******************************.***********985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 143 aa     Download sequence    
MEIDTQAAVE VQADGDATAG EEESAAMLVD GGRVSKRSLD RVKGPWSPDE DAKLSQLVSN  60
FGARNWSLIA RGIPGRSGKS CRLRWCNQLD PAVKRKPFTG NLAFFIVLVM ELFSFLICWI  120
SACFLIIVNI LIFEESSSLE KIR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G55730.13e-29MYB family protein