PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN24875.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family C2H2
Protein Properties Length: 456aa    MW: 49138.2 Da    PI: 6.923
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN24875.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.60.00043122147123
                 EEET..TTTEEESSHHHHHHHHHH.T CS
     zf-C2H2   1 ykCp..dCgksFsrksnLkrHirt.H 23 
                 + C    C ksF  ks++++Hi+  H
  PIN24875.1 122 FICAapQCLKSFLKKSDFESHINEiH 147
                 6788889***************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 456 aa     Download sequence    
MLQIRLSKPA SETGASAKPV PVDTVTVACP DHLVLADLPV AKCLGSPCAT AAVKIVGRRS  60
RRQLGERVHF CVRCDFPIAI YGRLSPCEHA FCLDCARSDS LCYLCYERVQ KIQTIKMMEG  120
IFICAAPQCL KSFLKKSDFE SHINEIHANL VHPKKEQEGN ESEAMSARKP SASESTVQAP  180
PRPVFSPGSN SQVNDREDKI QRSQSRDEPP SRPVMTPGSV PPFSGQAPNP PSGQHPDSNQ  240
SHLFDRAAQN RFPQQPFDPQ GQGGPQQDSV NPNSVLPPPQ FGYPPYPSDG NQPFFGASYE  300
MARPDSMPEA GPGQGSLLGF PPGPAGPMNY AQNYPQPWNM GPVSGPLEPP MVSQGTPEGF  360
VNADPQGRGF FQGDYGHNVG ILPSNVPPPA ANKGADQRQG GNFVDPRDGK GVLAHQPLAL  420
PPPPPMPPPH LPQLQRGRSY DGNHDAPPGF GWQPDT