PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN24888.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

WOX

Protein Properties

Length: 164aa MW: 18885 Da PI: 7.2135

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN24888.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	41.8	1.8e-13	26	65	22	57
SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 22 nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +++p+++++++++++l +++ ++V++WFqN++a+e++ PIN24888.1 26 TKTPTTDQIQKISSQLsfygKIESKNVFYWFQNHKARERQ 65 799***********************************97 PP
2	Wus_type_Homeobox	76	5.6e-25	24	67	22	65
Wus_type_Homeobox 22 sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +G++tP++++iq+i+++L+ yGkie+kNVfyWFQN+kaRerqk+ PIN24888.1 24 TGTKTPTTDQIQKISSQLSFYGKIESKNVFYWFQNHKARERQKR 67 599***************************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 164 aa Download sequence
MDDYSAGFRI RTSRGGTGGG GTGTGTKTPT TDQIQKISSQ LSFYGKIESK NVFYWFQNHK 60 ARERQKRRRV LVDEDYDINM HLHDHTNKIS STKHFAEINY QVPEPERSIE TLQLFPLNSF 120 SETDHCSDKL RLFTDACKEN NVSLSYNISS EMDHPTLDLR LSFL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	66	70	KRRRV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G11260.1	7e-36	WOX family protein