PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN24919.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

MYB

Protein Properties

Length: 437aa MW: 47856.4 Da PI: 5.422

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN24919.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.8	3.9e-16	39	86	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT Ed +lv +v+++G g+W+++ ++ g+ R++k+c++rw ++l PIN24919.1 39 KGPWTSAEDAILVAYVTKHGEGNWNAVHKRTGLARCGKSCRLRWANHL 86 79******************************************9986 PP
2	Myb_DNA-binding	45.9	1.3e-14	94	135	3	46
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 + ++eE++l+v++++++G++ W++ a++++ gRt++++k++w++ PIN24919.1 94 PISQEEEDLIVKLHAKMGNK-WARMAAELP-GRTDNEIKNFWNT 135 679***************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 437 aa Download sequence
MSMTSESDES TMPKNCIDSL AVEDDGGGGD VGPNGPLKKG PWTSAEDAIL VAYVTKHGEG 60 NWNAVHKRTG LARCGKSCRL RWANHLRPDL KKVPISQEEE DLIVKLHAKM GNKWARMAAE 120 LPGRTDNEIK NFWNTRIKRK ERAGLPIYPP EICTEASNGN QQSDNLSAFP SADAHYPDFI 180 PVNNFEIPPI EFKNFELHQK LYPQALLDTP ASCLLDIPSS GLLPQVLPPS YPIKLLPPTV 240 HPPKRLRGSQ SSFPSLNAGI ANVIPFGSQY PDDVSVQNTQ SLIYSSSYDN PNSASNSYDH 300 MGRHAVLNGN PSSSEPAWPT KMELPSLQTQ VGYWGSPSSP LPSLESPTQN NLSSNLSPRS 360 SGLLDAVLYG SHTVKNSTNS FLQQNWNAVD IIDASSQDFY ETKWEACEPI SPFGRSSSSL 420 FSEGTLMSGI SFDEPNM

Sequence ? help Back to Top

Protein Sequence Length: 437 aa Download sequence

MSMTSESDES TMPKNCIDSL AVEDDGGGGD VGPNGPLKKG PWTSAEDAIL VAYVTKHGEG  60
NWNAVHKRTG LARCGKSCRL RWANHLRPDL KKVPISQEEE DLIVKLHAKM GNKWARMAAE  120
LPGRTDNEIK NFWNTRIKRK ERAGLPIYPP EICTEASNGN QQSDNLSAFP SADAHYPDFI  180
PVNNFEIPPI EFKNFELHQK LYPQALLDTP ASCLLDIPSS GLLPQVLPPS YPIKLLPPTV  240
HPPKRLRGSQ SSFPSLNAGI ANVIPFGSQY PDDVSVQNTQ SLIYSSSYDN PNSASNSYDH  300
MGRHAVLNGN PSSSEPAWPT KMELPSLQTQ VGYWGSPSSP LPSLESPTQN NLSSNLSPRS  360
SGLLDAVLYG SHTVKNSTNS FLQQNWNAVD IIDASSQDFY ETKWEACEPI SPFGRSSSSL  420
FSEGTLMSGI SFDEPNM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G11440.1	2e-69	MYB family protein