PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN24923.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family GRAS
Protein Properties Length: 326aa    MW: 36935.4 Da    PI: 6.4029
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN24923.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS285.51.5e-87432456374
        GRAS  56 svselykalppsetseknsseelaalkl.fsevsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg 153
                 s++++y++l + ++++  s e++  + l f evsP+  f+h+++N aI+ea+ege+++HiiD++ ++++QWp+Ll+a+a+R++++p+lR+T++   +++
  PIN24923.1   4 SCHQTYRSLISASEKNI-SFESMRKMMLkFLEVSPWTMFGHVACNGAIMEALEGESKLHIIDISNTYCTQWPTLLEAIATRANETPHLRVTTIIVDDTT 101
                 56777777744444422.33333333336***************************************************************9876666 PP

        GRAS 154 ..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhns 250
                    ++ ++e+g r++kfA+ +gvpf+fnv+ +  l++l++  L++k++Eala+n+v +lh+     +s +  rd +++++++l+P++++vve+ead++ 
  PIN24923.1 102 ggGARVMKEIGIRIEKFARLTGVPFKFNVICHAVLSELNVAGLDIKEDEALAINCVGALHSAK---ASDN-SRDFLISTFRRLQPRIFTVVEEEADLDF 196
                 789**************************9999*****************************8...4444.4888*******************99854 PP

        GRAS 251 e....sFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk 345
                 +    +F+++f e+l+++ + f++l++++pr+s+er ++Er+  gr++v++vac   +++er et+++W++rl++ GF++v+++e++ +++++llr++k
  PIN24923.1 197 GidkiEFVRGFQECLRWFRVYFEALDETFPRTSKERLMLERA-AGRAVVDLVACPRGDSVERLETVARWSHRLRAGGFSTVSFGEEVCDDVRSLLRRYK 294
                 44455*************************************.******************************************************** PP

        GRAS 346 sdgyrve..eesgslvlgWkdrpLvsvSaWr 374
                  dg+ +   ++s  ++l Wkd+++v++SaW+
  PIN24923.1 295 -DGWAMSqcSDSTGIFLSWKDQRVVWASAWK 324
                 .665555337788889**************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    
MMDSCHQTYR SLISASEKNI SFESMRKMML KFLEVSPWTM FGHVACNGAI MEALEGESKL  60
HIIDISNTYC TQWPTLLEAI ATRANETPHL RVTTIIVDDT TGGGARVMKE IGIRIEKFAR  120
LTGVPFKFNV ICHAVLSELN VAGLDIKEDE ALAINCVGAL HSAKASDNSR DFLISTFRRL  180
QPRIFTVVEE EADLDFGIDK IEFVRGFQEC LRWFRVYFEA LDETFPRTSK ERLMLERAAG  240
RAVVDLVACP RGDSVERLET VARWSHRLRA GGFSTVSFGE EVCDDVRSLL RRYKDGWAMS  300
QCSDSTGIFL SWKDQRVVWA SAWKPL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37650.11e-142GRAS family protein