PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN24976.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

HSF

Protein Properties

Length: 188aa MW: 21889.9 Da PI: 10.1054

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN24976.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	117.2	1e-36	14	105	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl k ye+++de+++elisw+e+++sf+++de++f++++L+kyFkhsnf+SFvRQLn+YgF+kv++++ w+F+++ F kg+k+ll++i PIN24976.1 14 FLVKCYEMVNDESTNELISWTETNDSFIIWDESKFSSQLLKKYFKHSNFSSFVRQLNIYGFRKVDTDR---------WQFANDAFIKGQKHLLKNIS 101 9***************************************************************99.........**************** PP XXXX CS HSF_DNA-bind 99 rkks 102 r+k+ PIN24976.1 102 RRKQ 105 98 PP

Sequence ? help Back to Top
Protein Sequence Length: 188 aa Download sequence
MVKSVENGTS LPPFLVKCYE MVNDESTNEL ISWTETNDSF IIWDESKFSS QLLKKYFKHS 60 NFSSFVRQLN IYGFRKVDTD RWQFANDAFI KGQKHLLKNI SRRKQPQSVV PKKSAQQREA 120 DPPVASEEDK IAALWKEVEN LKTDKTALTQ ELKNLRQHQE TSQSKLLLLR EQLKAQRQQL 180 ACGGNRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67970.1	5e-57	HSF family protein