PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN25053.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family GATA
Protein Properties Length: 233aa    MW: 26583 Da    PI: 5.4504
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN25053.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA572.6e-18153187135
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                 C++C t +Tp+WR gp g++tLCnaCG+++++ +l
  PIN25053.1 153 CRHCETESTPQWRMGPLGPRTLCNACGVRFKSGRL 187
                 *******************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    
MILENNNDFT DILSELTTLD GLNESEISSG DWETKLCIPH DRLEDIEFFP NFRDDLISLP  60
GNLLIPDETS CNSFDVIKFK PKDLSKAHDE LLKVSSREDS KNKKRKIEED SGMVLWVKSP  120
KKPRNQKTKW TESFKALFDL SLGQQDENQI LKCRHCETES TPQWRMGPLG PRTLCNACGV  180
RFKSGRLLPE YRPAASPTFD SEKHSNFHRK IIQKKLVEDN AGGDNTGEVV DSL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1103129KKRKIEEDSGMVLWVKSPKKPRNQKTK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32890.15e-34GATA family protein