PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN25142.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family C2H2
Protein Properties Length: 407aa    MW: 45450.9 Da    PI: 9.5828
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN25142.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.10.00059342361323
                 ETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   3 CpdCgksFsrksnLkrHirtH 23 
                 C+ Cgk+F  ++ L+ H+r++
  PIN25142.1 342 CSQCGKPF-KPERLHAHMRSC 361
                 ********.**********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 407 aa     Download sequence    
MEAAEVRRLH IVYFLSRKGH IEHPHLIRVH HLSRNGVRLR DIKRWLGELR GEDMPESYSW  60
SYKRRYKTGY VWQDLLDDDL ITPISDNEYV IKGSEITSKI RGFSFADDKV SKQKDQSSPQ  120
EDHKTISETS LYISTKSSSE IEEESPTFGS ETSTLTDDSG KFDMDKISDK MKQEKKTSHD  180
ETEHSTPFYS TFLSKKTKKK SNKVTIDEKI STSTADSSNP SSSETHFAKS KSHSNGASSI  240
FRNLITCGTV ETNDSAVVAT DKKLNKPVPN MCPSDLGNVH SAEICKRDIF GGSQRVFGTP  300
SWTQQQWSGR KSFDGVKDSA KNELRDQWAT VAAYKPINGP NCSQCGKPFK PERLHAHMRS  360
CKGMKTMSKS TAANAEISAA AAAADKKSKA TKESKNVRSV SGRLLGC