PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN25148.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family B3
Protein Properties Length: 154aa    MW: 17573.9 Da    PI: 5.0118
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN25148.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B343.27e-1438124496
                 E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
          B3   4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                 vl  s+v+ s +l +p + ++e  +    ++ ++    + + W++ +   ++ ++  l + Wk+Fv++n+Lk gD +vF+l+++s+ + ++kv
  PIN25148.1  38 VLGMSHVSPSYQLPIPARIVRELPQA---TVPVV-LRYNCKNWNLSY--MGNCSSPRLDSKWKNFVNDNNLKIGDACVFELMENSSSNIRFKV 124
                 55568888889999999999888533...22344.44588*******..999999*************************9977555555544 PP
Sequence ? help Back to Top
Protein Sequence    Length: 154 aa     Download sequence    
MEQPLQQSSE PKDNEKEVEK YEEDDISYLS GKPFFDVVLG MSHVSPSYQL PIPARIVREL  60
PQATVPVVLR YNCKNWNLSY MGNCSSPRLD SKWKNFVNDN NLKIGDACVF ELMENSSSNI  120
RFKVHILRGD LPPELRAKVD GRGQATENNP MQVD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.14e-11B3 family protein