PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN25149.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family B3
Protein Properties Length: 161aa    MW: 18292.6 Da    PI: 5.3103
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN25149.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B349.29.7e-1644136197
                 EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS.SEE..EEEEE CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.gr.sefelvvkvf 97 
                 f+ vl +s+v +s +l lp + ++e  +    ++ ++    + + W++ +   ++ ++  + +GW++Fv++n+Lk+gD +vF+l+  + ++ +++v+++
  PIN25149.1  44 FDMVLAKSHVQQSFQLQLPARIVRELPKA---TVPVV-LRYNCKNWNLSY--IGNCKAPRFDTGWRNFVNDNNLKSGDACVFELKeCSpENIRFKVHIL 136
                 6678999****************999533...23344.44588*******..99999999***********************9854455556666665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 161 aa     Download sequence    
MEPLLQQSVE RGVRDQQNSK LAEKSEAAES DEDSIRYLTS ETFFDMVLAK SHVQQSFQLQ  60
LPARIVRELP KATVPVVLRY NCKNWNLSYI GNCKAPRFDT GWRNFVNDNN LKSGDACVFE  120
LKECSPENIR FKVHILRGDL PPELAAAVET HGTKDNPIDV D
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.17e-11B3 family protein