PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN25206.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

FAR1

Protein Properties

Length: 740aa MW: 86184.6 Da PI: 8.5672

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN25206.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	65.3	1.6e-20	57	145	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 fY +Y+++ GF+vr+ ++k+ + +++ ++vCs+ g+r++ k +++++rr+r+etr+gC+a+++v ++ dg ++vt+++ HnH+l PIN25206.1 57 FYWNYGRQNGFDVRRCHKKTV-NGSLVKNVEWVCSRAGFRQPLKYEARRKRRPREETRCGCEARFRVAHDRhDGLYKVTEFVPFHNHALE 145 9************998877.777799***********************************99998**************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 740 aa Download sequence
MDEDKKEGQC YGNSVDDKSD RGLDAKGRVS LESNFLQLNP EEVGELVFHS PDEADWFYWN 60 YGRQNGFDVR RCHKKTVNGS LVKNVEWVCS RAGFRQPLKY EARRKRRPRE ETRCGCEARF 120 RVAHDRHDGL YKVTEFVPFH NHALETPETA HRLRCYRHLK PSEKNLLSGM TSAGISPSKA 180 IDYLQHIEGG AEKVAFRRKD VYNYLNKQRM LMTRDGDVNT ALSLLDGMKL HDKDMIFEYT 240 VDEEHALTRL FWTDGLSRAE FDLFGDVVVF DSTYKTNTYC FPLVIIAGVD NHYSTCVFGA 300 ALLYNETIES YQWLLQKFRE AMGGKMPMSV LTDQDAAMHA AIEIEFPFAK HRICSWHLER 360 NAMQNTHIPE FARDFAQLLK KTYSIEEFES SWLTLIERHG VADHPWIIDI FKKKELCGEA 420 YFRGHFFGMM RTTQRSESMN YLMKQCLKQR MKLTEFLKQY HLCIQKMRAT FFWNQEDSER 480 STPALLIDAL NSLEKHAAFV YTKKVFEMVS KEIRKEQDLV VEEASNHDGN KFTFQFSSYA 540 KAHGKPVTVQ IDWVAQKFQC DCEKLESTGL PCRHLISAFK LLRLQEFPQQ CIKERWTVKI 600 GKELRVNFPT PFPFEDEQRR RFAILNRECA SLCLQASQSE QATFKSLMRI QDLVQEVEYE 660 NTTKSPSKDS VQLGKVKLPT AWDPKRTRLS HDVHNPKKIR SRGAPKAKQQ NCRKCGRAIK 720 QILVDAVQES LPVIMMVVRM

Sequence ? help Back to Top

Protein Sequence Length: 740 aa Download sequence

MDEDKKEGQC YGNSVDDKSD RGLDAKGRVS LESNFLQLNP EEVGELVFHS PDEADWFYWN  60
YGRQNGFDVR RCHKKTVNGS LVKNVEWVCS RAGFRQPLKY EARRKRRPRE ETRCGCEARF  120
RVAHDRHDGL YKVTEFVPFH NHALETPETA HRLRCYRHLK PSEKNLLSGM TSAGISPSKA  180
IDYLQHIEGG AEKVAFRRKD VYNYLNKQRM LMTRDGDVNT ALSLLDGMKL HDKDMIFEYT  240
VDEEHALTRL FWTDGLSRAE FDLFGDVVVF DSTYKTNTYC FPLVIIAGVD NHYSTCVFGA  300
ALLYNETIES YQWLLQKFRE AMGGKMPMSV LTDQDAAMHA AIEIEFPFAK HRICSWHLER  360
NAMQNTHIPE FARDFAQLLK KTYSIEEFES SWLTLIERHG VADHPWIIDI FKKKELCGEA  420
YFRGHFFGMM RTTQRSESMN YLMKQCLKQR MKLTEFLKQY HLCIQKMRAT FFWNQEDSER  480
STPALLIDAL NSLEKHAAFV YTKKVFEMVS KEIRKEQDLV VEEASNHDGN KFTFQFSSYA  540
KAHGKPVTVQ IDWVAQKFQC DCEKLESTGL PCRHLISAFK LLRLQEFPQQ CIKERWTVKI  600
GKELRVNFPT PFPFEDEQRR RFAILNRECA SLCLQASQSE QATFKSLMRI QDLVQEVEYE  660
NTTKSPSKDS VQLGKVKLPT AWDPKRTRLS HDVHNPKKIR SRGAPKAKQQ NCRKCGRAIK  720
QILVDAVQES LPVIMMVVRM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	3e-84	FAR1 family protein