PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN25296.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family G2-like
Protein Properties Length: 320aa    MW: 34878.7 Da    PI: 6.6431
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN25296.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like95.34.5e-30129182155
     G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                 k+rl+Wtp+LH+rFv+av++L G ++A+Pkti++lm+v+gLt+e+v+SHLQkYRl
  PIN25296.1 129 KARLVWTPKLHKRFVDAVAHL-GLKNAVPKTIMQLMNVDGLTRENVASHLQKYRL 182
                 68*******************.9*******************************8 PP
2Myb_DNA-binding48.42.1e-15131181148
                      TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r+ WT+ +++++vdav+ lG +   +ktI++ m+  g+t++++ s++qky+
       PIN25296.1 131 RLVWTPKLHKRFVDAVAHLGLKnaVPKTIMQLMNvDGLTRENVASHLQKYR 181
                      789***********************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    
MGEEVRIDEG VADWEVGLPS PDDLTPLSQS LIPAELASAF RIQAEPTRTL LDVNRASQST  60
LSSLRGGGGH SSGNFKSFSG HVDDHVIAEE EVEEGSDLKK VRMEESADDP AIDNCTDDQS  120
TAAGKTSKKA RLVWTPKLHK RFVDAVAHLG LKNAVPKTIM QLMNVDGLTR ENVASHLQKY  180
RLYVKRMQGL SNEGPSSSDH LFASIPVPPQ SFNESSSAGP SHGNGIANGS HSSVGNGGTA  240
NNHVGMPMPM PYPPPPQMMP MQMMGMAPHG HGFQGYEAAH SHHNHHYQQQ YSSMVQQQRD  300
WSGNKYNGYP HHVTQNNNKF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G46640.24e-68G2-like family protein