PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN25399.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family ERF
Protein Properties Length: 206aa    MW: 22723.3 Da    PI: 5.9505
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN25399.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP247.64.2e-153483255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                 y+GVr++   g+Wv+e+r+p   +k++r++lg+f  +e Aa a++ a+++l+g
  PIN25399.1 34 IYRGVRQKN-GGKWVCEVREP---NKKTRIWLGTFPNPETAAVAHDVAALALRG 83
                69****765.9******9998...347*************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 206 aa     Download sequence    
MDFEDNQSSS SSSPPHNHKK RAGRKIFKET RHPIYRGVRQ KNGGKWVCEV REPNKKTRIW  60
LGTFPNPETA AVAHDVAALA LRGDNAPLNF PDSAASLPRP QSSSQKDIQR AAFQAARDFR  120
LVSGSSGQTR VSDVELVTCN HGPGDCESGN NALEGYVDEE EVFNMPVLLD SMAEGMLLTP  180
LAMKKGFNWS DHEDDDGIEI MALWGN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25490.14e-43ERF family protein