PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN25534.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family HB-other
Protein Properties Length: 131aa    MW: 15056.3 Da    PI: 10.3195
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN25534.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox38.91.4e-12451653
                S--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHH CS
    Homeobox  6 tftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRa 53
                +f+k+q+++Le++F++++y++++++ eL k +gL+ +q+  WF   Ra
  PIN25534.1  4 RFNKHQIDALESAFKESMYLTKRKKIELVKATGLDVEQIASWFSRIRA 51
                69*****************************************98887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 131 aa     Download sequence    
MAKRFNKHQI DALESAFKES MYLTKRKKIE LVKATGLDVE QIASWFSRIR AVKRAKKSVG  60
DLERTKVELQ EALQGSKERE AKLKNELEGS KRHQTELYAE NQRLRQQLGV TGNDAMFDPI  120
ASLLNRCVCS F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69780.17e-08HD-ZIP family protein