PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN25535.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family HB-other
Protein Properties Length: 128aa    MW: 15373.6 Da    PI: 10.0653
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN25535.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox37.15.3e-12454656
                S--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
    Homeobox  6 tftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                +f+k+q++ L+++Fe++ ++++e++  LA+ +gL+ +q++ WF  +R +++
  PIN25535.1  4 RFEKSQIDLLKAAFEESEHLTKEKKIYLARVTGLDMEQITSWFNRKRGRKR 54
                79******************************************9999887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 128 aa     Download sequence    
MARRFEKSQI DLLKAAFEES EHLTKEKKIY LARVTGLDME QITSWFNRKR GRKRAKEAMG  60
ELERINTELK KTLQQHQEQE MKLQHELQQS RRKEAELEEE NQRLKRRLTI IEGDLRFDSI  120
ISSINGYL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G18550.12e-09HD-ZIP family protein