PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN25538.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family HB-other
Protein Properties Length: 133aa    MW: 15771.1 Da    PI: 9.7913
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN25538.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox44.91.9e-14454656
                S--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
    Homeobox  6 tftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                +f+++qle+L ++F+++ ++++e++ eL + +gL+ +q+  WF  rRa+++
  PIN25538.1  4 RFENHQLEVLRAAFRESENLTKEKKNELVAATGLDVEQIASWFSHRRARKR 54
                69***********************************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 133 aa     Download sequence    
MAKRFENHQL EVLRAAFRES ENLTKEKKNE LVAATGLDVE QIASWFSHRR ARKRSKEAMA  60
ELELEHSRPK QAIKISRGNE AQLKKELLES KKREAELQDE NWRLKERITI AESDKQFCLL  120
KKWIAYPDTY MDL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36740.13e-07HD-ZIP family protein