PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN25623.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

WRKY

Protein Properties

Length: 266aa MW: 29671.4 Da PI: 7.8927

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN25623.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	105.3	3.2e-33	159	216	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK vk+s+fprsYYrCt+++C vkk++ers+e+p+vv++tYeg+Hnh+ PIN25623.1 159 EDGYRWRKYGQKAVKNSPFPRSYYRCTTQKCGVKKRIERSHENPTVVITTYEGQHNHH 216 8********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 266 aa Download sequence
MSSENNNPYP FYNPFHQDSE GFSFPIITNH NQNHNPINNP FELPQQNPSE FHQSSSSSSH 60 MSFSSTFDLS CSSSDQVAAC NFINNSSEVV HNSSPSCSSP EAGVEEDSSK SKTDPKTKAN 120 CEEDDGKLSK KVSKAKKEGK KERGPRFAFM TKSEIDNLED GYRWRKYGQK AVKNSPFPRS 180 YYRCTTQKCG VKKRIERSHE NPTVVITTYE GQHNHHSPAT VRGSAAIMLA PSLFSPPPAA 240 AFSGFSQDHL FFPSXGFGYS YSIFVF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G29860.1	2e-44	WRKY family protein