PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN25665.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

FAR1

Protein Properties

Length: 867aa MW: 99031.4 Da PI: 8.4623

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN25665.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	79.5	6.1e-25	79	183	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...............tekerrtraetrtgCkaklkvkkekdgkwevtklele 84 k+Y++YA +vGFs +++s++s+ +g++++++fvC+++g+++ + + +++ r +r+ ++t+Cka+++vk+++dg+w ++++ e PIN25665.1 79 KYYKDYAASVGFSAIIKASRRSRISGKFIDAKFVCTRYGSKRGSCLSensqltdvtssipvkKKRGRINRSWSKTDCKACMHVKRRQDGRWIISSFIRE 177 69***********************************998876666789****998888899*************************** PP FAR1 85 HnHela 90 HnH+l+ PIN25665.1 178 HNHDLV 183 **97 PP

Sequence ? help Back to Top
Protein Sequence Length: 867 aa Download sequence
MRIDLEHPSC GNNKGSGLLN DTARFEVSKG GEATVTAPRI GGYDDTWKLP DGDGVTMSCQ 60 KSLEPHDSVE FESKEDAFKY YKDYAASVGF SAIIKASRRS RISGKFIDAK FVCTRYGSKR 120 GSCLSENSQL TDVTSSIPVK KKRGRINRSW SKTDCKACMH VKRRQDGRWI ISSFIREHNH 180 DLVRGQAGVR DTDISKFNLH PSNAVRVRQK KTCMSMSQQS GQMQKAEGHD SISSSSSGLR 240 LGSREGDAQV MLEYFASMQD GNPYFFYALD FNGEQLLKNV FWVDAKGRID YQNFGDVVLL 300 DTMYRKNEFK LPFVPFIGMN NHFQLLLLGN ALVADGSKST YVWLMHAWVR SMHGQAPKVI 360 LTDQEPALKE AIAEVLPGSR HCYCLWHILS KMQEKIGSVI RKHENFTNKF YKCILKSQTE 420 AQFEKRWWKL VDRFDLRNDE WIQSLYDDRL RWVPTLLKDV FLAGLSSIQR LESIASLLDK 480 CLLRKTSLKE FLHQYNIMLQ EKYEDEAKED FNTWHGQPGL KSPSPYGKQM ATIYTHAVFK 540 KFQVEVLGVV ACHPKIEMKD GATTTFKVQD YEENQVYKVT WNEKTSDTSC SCLLFEYNGF 600 LCRHVMIVLQ ISGVNNIPAK YILKRWTKDA KNRETMTQVG SVESRNQRYN GFCQHACKLG 660 DEGSLCQETY SIAFAALEEA LRKCESINNS VHPNPHPNDD LHEFEEVIRG KFTSRTNKEG 720 IISRKEKVHP EQEVTITGMH WWDQMGYLNI RASALDCSYG SEERVQGVGQ VNLRVPTTGE 780 ISCNSEKVQV EQLNAIAPNG SECYHNQAHI QGLGQLNSTA SANDAHRFCL ERLHQMGQLH 840 FRSQNVQNSL LIHPNKQNQQ FKIMERL

Sequence ? help Back to Top

Protein Sequence Length: 867 aa Download sequence

MRIDLEHPSC GNNKGSGLLN DTARFEVSKG GEATVTAPRI GGYDDTWKLP DGDGVTMSCQ  60
KSLEPHDSVE FESKEDAFKY YKDYAASVGF SAIIKASRRS RISGKFIDAK FVCTRYGSKR  120
GSCLSENSQL TDVTSSIPVK KKRGRINRSW SKTDCKACMH VKRRQDGRWI ISSFIREHNH  180
DLVRGQAGVR DTDISKFNLH PSNAVRVRQK KTCMSMSQQS GQMQKAEGHD SISSSSSGLR  240
LGSREGDAQV MLEYFASMQD GNPYFFYALD FNGEQLLKNV FWVDAKGRID YQNFGDVVLL  300
DTMYRKNEFK LPFVPFIGMN NHFQLLLLGN ALVADGSKST YVWLMHAWVR SMHGQAPKVI  360
LTDQEPALKE AIAEVLPGSR HCYCLWHILS KMQEKIGSVI RKHENFTNKF YKCILKSQTE  420
AQFEKRWWKL VDRFDLRNDE WIQSLYDDRL RWVPTLLKDV FLAGLSSIQR LESIASLLDK  480
CLLRKTSLKE FLHQYNIMLQ EKYEDEAKED FNTWHGQPGL KSPSPYGKQM ATIYTHAVFK  540
KFQVEVLGVV ACHPKIEMKD GATTTFKVQD YEENQVYKVT WNEKTSDTSC SCLLFEYNGF  600
LCRHVMIVLQ ISGVNNIPAK YILKRWTKDA KNRETMTQVG SVESRNQRYN GFCQHACKLG  660
DEGSLCQETY SIAFAALEEA LRKCESINNS VHPNPHPNDD LHEFEEVIRG KFTSRTNKEG  720
IISRKEKVHP EQEVTITGMH WWDQMGYLNI RASALDCSYG SEERVQGVGQ VNLRVPTTGE  780
ISCNSEKVQV EQLNAIAPNG SECYHNQAHI QGLGQLNSTA SANDAHRFCL ERLHQMGQLH  840
FRSQNVQNSL LIHPNKQNQQ FKIMERL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22170.2	0.0	FAR1 family protein