PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN25756.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family C3H
Protein Properties Length: 158aa    MW: 17337.5 Da    PI: 8.2077
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN25756.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH32.91.1e-106385527
                --SGGGGTS--TTTTT-SS-SSS CS
     zf-CCCH  5 lCrffartGtCkyGdrCkFaHgp 27
                +C++f rtG C+yGd+Ck+ H++
  PIN25756.1 63 ICNRFVRTGSCQYGDSCKYYHPK 85
                7********************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 158 aa     Download sequence    
MPLGKYYCDY CDKQFQDTPA ARRRHLQGVV HQRAKALWYD AVRSSAHLGL DQVQDPQSIG  60
KGICNRFVRT GSCQYGDSCK YYHPKKNVPN MDTQGTEGTS FVNNAQSQGI PGSLLHGEAS  120
LPAVLFGNQM GASLGNLPPS LWPPPEGGYP PLPFIDWG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G26749.11e-31C3H family protein