PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN25792.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

TCP

Protein Properties

Length: 376aa MW: 39845.7 Da PI: 7.5291

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN25792.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	134.2	1.2e-41	73	214	2	120
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg........... 88 ++k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+pa++++tgt++++a+++ + s +ss+s+ s + PIN25792.1 73 PPKRTSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTsLNISLRSSGSSMSVPsqlrspffspn 171 789******************************************************************999877777777775555577778899998 PP TCP 89 ..........kaaksaakskksqksaasalnlak...esrakara 120 ++++s++ +++ ++ + nl++ e r+ a + PIN25792.1 172 yttpyrwgifQESSSTTMLNFQAANLN--PNLMRtkeEIRETAAE 214 899999988755555555555555555..5555521233333333 PP

Sequence ? help Back to Top
Protein Sequence Length: 376 aa Download sequence
MEGGDDHLHH HRHHPHGRAT FPFQLLEKKD DESATCSTST AYPSPDATSS NPSTTPRSST 60 STIAAAEPSK KPPPKRTSTK DRHTKVDGRG RRIRMPALCA ARVFQLTREL GHKSDGETIE 120 WLLQQAEPAV IAATGTGTIP ANFTSLNISL RSSGSSMSVP SQLRSPFFSP NYTTPYRWGI 180 FQESSSTTML NFQAANLNPN LMRTKEEIRE TAAEDGLGRK RRADEELQPP QHHQIGNYLL 240 QSSTGALPAS QASIPANFWM LSNSNNNNNN QAMGGDPVWP FPNINSSSSS GAALYRGTMA 300 SGLHFMNFPT PVALLQGGGG GDGGGGGGGN GLGEGQLGML AGLNSYRSAG GGVSESQASG 360 SHGGGDDRPE DSSHHS

Sequence ? help Back to Top

Protein Sequence Length: 376 aa Download sequence

MEGGDDHLHH HRHHPHGRAT FPFQLLEKKD DESATCSTST AYPSPDATSS NPSTTPRSST  60
STIAAAEPSK KPPPKRTSTK DRHTKVDGRG RRIRMPALCA ARVFQLTREL GHKSDGETIE  120
WLLQQAEPAV IAATGTGTIP ANFTSLNISL RSSGSSMSVP SQLRSPFFSP NYTTPYRWGI  180
FQESSSTTML NFQAANLNPN LMRTKEEIRE TAAEDGLGRK RRADEELQPP QHHQIGNYLL  240
QSSTGALPAS QASIPANFWM LSNSNNNNNN QAMGGDPVWP FPNINSSSSS GAALYRGTMA  300
SGLHFMNFPT PVALLQGGGG GDGGGGGGGN GLGEGQLGML AGLNSYRSAG GGVSESQASG  360
SHGGGDDRPE DSSHHS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47620.1	1e-49	TCP family protein