PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN25817.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

bHLH

Protein Properties

Length: 303aa MW: 31762.8 Da PI: 6.0488

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN25817.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	30.2	7.8e-10	152	196	5	54
HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 h+++Er RR+ri +++ L+el+P+ + K + a++L + v+Y+k L PIN25817.1 152 HSIAERLRRERIAERIRALQELVPSvN------KTDRAAMLDEIVDYVKFL 196 99*********************55......**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 303 aa Download sequence
MANNPGETPS DDFLEQILGF PGYAAGAEAN LAGNEGAPAA MMLQLGSGDG SSHLGAMGVG 60 LGVGLGGGYG VGSGGGGFPL GLSLEQGKTG FNDASGSGKR FFRDDVVDSR ASSSVRPGFH 120 AQPMTNTVPA APHPPGIRPR VRARRGQATD PHSIAERLRR ERIAERIRAL QELVPSVNKT 180 DRAAMLDEIV DYVKFLRLQV KVLSMSRLGG AGAVAPLVTD IPISSVEEEG NEGGRAQPAW 240 EKWSNDGTER QVAKLMEENV GAAMQFLQSK ALCIMPISLA SAIYHTQPPD TTSLVKPESN 300 PPP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	157	162	RLRRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G02590.2	1e-104	bHLH family protein