PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN25974.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family WOX
Protein Properties Length: 313aa    MW: 35702.2 Da    PI: 9.118
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN25974.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox72.64.3e-2384143357
                 --SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
    Homeobox   3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 
                 +R+++t+eql++Lee++++ +r+psae+++++A+kl    +++ ++V++WFqN++a+e++
  PIN25974.1  84 TRWNPTPEQLQALEEMYRRgTRTPSAEQIQQIAAKLrrfgKIEGKNVFYWFQNHKARERQ 143
                 8*****************99**************************************97 PP
2Wus_type_Homeobox114.93.9e-3783145365
  Wus_type_Homeobox   3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 
                        +tRW+PtpeQ++ Lee+y++G+rtP++e+iq+i+a+L+++Gkie+kNVfyWFQN+kaRerqk+
         PIN25974.1  83 STRWNPTPEQLQALEEMYRRGTRTPSAEQIQQIAAKLRRFGKIEGKNVFYWFQNHKARERQKK 145
                        79***********************************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    
MWMMQSNNDH GKELKMSADR KLRPLMPRPI ISSCNSNSSP FSTMSTSCCC CIHNPNIIPW  60
NHPPSGLSDY GAKREIQTVP LVSTRWNPTP EQLQALEEMY RRGTRTPSAE QIQQIAAKLR  120
RFGKIEGKNV FYWFQNHKAR ERQKKRRQLE LLESNQKGLS RRYFEIENNK KLATASSCST  180
PSEDSVSMRG AVIAERKQDG WTRSHQRELQ QINKNETSSC SQLDLSSCLP SYHSIHTINA  240
HKSSNQENAK PSPALNLSIF CSPKNYEGGI KEDQTTLQLF PTGTTDLGTQ LNEEEIHAKF  300
TPNEFIEFLP TKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18010.13e-36WOX family protein