PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN25984.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family HD-ZIP
Protein Properties Length: 229aa    MW: 25454.8 Da    PI: 5.9257
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN25984.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox62.66e-2076130256
                 T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
    Homeobox   2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                 rk+ ++tkeq ++Lee F +n++++ +e+e LA +l+L+ rqV vWFqNrRa+ k
  PIN25984.1  76 RKKLRLTKEQSRVLEETFIQNHTLNPKEKEALAVELKLKPRQVEVWFQNRRARSK 130
                 78889************************************************98 PP
2HD-ZIP_I/II110.31.3e-3576164189
  HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLre 89 
                  +kk+rl+keq+++LEe+F ++++L+p++K++la eL+l+prqv+vWFqnrRAR k+k +E++ye+Lk+   +l+e+n+rL+keveeLr+
   PIN25984.1  76 RKKLRLTKEQSRVLEETFIQNHTLNPKEKEALAVELKLKPRQVEVWFQNRRARSKMKLMEMEYEYLKKLSGTLTEQNRRLKKEVEELRA 164
                  69*************************************************************************************94 PP
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    
MEIFPNNSTC LELTIAVPGF NSSQPFPSSG EISGGGAMKA LDINQAPSGT EEECMEEEEE  60
DDESPNNNNN GGPAPRKKLR LTKEQSRVLE ETFIQNHTLN PKEKEALAVE LKLKPRQVEV  120
WFQNRRARSK MKLMEMEYEY LKKLSGTLTE QNRRLKKEVE ELRALTVAPP HSRQPMPSST  180
ITMCPCCERV TTTTALDKGP ATSTSAAAAT SAAKMSFLQQ RQPSATCYN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01430.13e-61HD-ZIP family protein