PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN26083.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family bHLH
Protein Properties Length: 259aa    MW: 29149.9 Da    PI: 6.587
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN26083.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH25.23.1e-08143190455
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +h+ +Er RR++iN+++  L++l+P +     k +  a +L   ++Y++sLq
  PIN26083.1 143 SHSLAERLRREKINEKLRCLQDLVPGC----YKTMGMAVMLDVIINYVRSLQ 190
                 8*************************8....355888888999999988887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    
MEEFNLLGHH NPKPSLSQMD LFNNLEGFNL PLSNQGFNSH DHQIPMPFHD EIPRSIGQIF  60
DPMAHFLPSG NTMNLMHEPE IQVNSSPSDS GTTGFLGPGK VNYKKHQVQN YGGRKRKRIS  120
EGEMEKPREV VHVRAKRGQA TDSHSLAERL RREKINEKLR CLQDLVPGCY KTMGMAVMLD  180
VIINYVRSLQ NQIDFLSMKL SAASLFYDFN SSEAEATETL QEWASQQGTS GYEAVPAMEK  240
LAGEAYGGTS HFQTVPWPL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25330.12e-53bHLH family protein