PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN26158.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family WRKY
Protein Properties Length: 337aa    MW: 36780.8 Da    PI: 10.1705
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN26158.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY100.11.4e-31266323359
                 -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 D y+WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+ +dp+++++tYegeHnh 
  PIN26158.1 266 DDYSWRKYGQKPIKGSPHPRGYYKCSSVrGCPARKHVERALDDPTMLIVTYEGEHNHA 323
                 99************************988****************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    
MAVELMPGYN FKSKMEETAA QEAAAAGLQS VEKLIRLLSH SHQQNLPEQS SSQLQNGNPI  60
AAAADYQAVA DVAVNKFKKF ISLLDRSPRT GHARFRRGPV SNSTPPQKIE PAAGLSIKTP  120
KPEDNVLPSK IYCPTPIQRL PPLPVPHHHQ QLVKNGSIER KESSTTINFA SPATSFRSTL  180
TGDTDSLQPS MSSGFQITNL SQVSSAGRPP LSTSSFKRKC SSMDDANAKC GGGASRCHCP  240
KKRKSRLKRV ERVPAISMKM ADIPPDDYSW RKYGQKPIKG SPHPRGYYKC SSVRGCPARK  300
HVERALDDPT MLIVTYEGEH NHAISNTEAS ALVLESS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24240.19e-86WRKY family protein