PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN26190.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family ERF
Protein Properties Length: 143aa    MW: 16121.4 Da    PI: 10.7556
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN26190.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP231.44.8e-10103142147
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaai 47 
                 +  +GV+++    +W A I++      +k+++lg+ g+ eeAa++++
  PIN26190.1 103 CVMRGVYFKN--LKWQAAIKVD-----KKQIHLGTVGSQEEAARLYD 142
                 568****966..5********4.....5******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 143 aa     Download sequence    
MVSIRRRKLL GMCSGRNSFL APLPWAFGHG HAPENGADNT KLASVHPLPS NDKPKEETSL  60
ETGLGSSNVS ASSPSKEHPM QHFPEVKRRK RHRRKQVENQ EPCVMRGVYF KNLKWQAAIK  120
VDKKQIHLGT VGSQEEAARL YDR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.23e-25ERF family protein