PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN26330.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

WRKY

Protein Properties

Length: 420aa MW: 46923.4 Da PI: 7.1523

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN26330.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	83.2	2.6e-26	152	209	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 dDgy+W KYG K+ +gs++prsYY+C +++Cp++kkver+ ++v++++Y+g+Hnh+k PIN26330.1 152 DDGYRWIKYGEKPLRGSNNPRSYYKCNHPKCPSRKKVERDF-SGNVTHVIYKGTHNHPK 209 8**************************************.9************85 PP
2	WRKY	93.9	1.2e-29	280	338	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYG K+vk++++prsYY+Cts gC+v+k++er+ +d ++v +Yeg+Hnh PIN26330.1 280 LDDGYRWRKYGEKMVKKNPNPRSYYKCTSYGCMVTKQIERAPDDLRLVLAKYEGRHNHA 338 59********************************************************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 420 aa Download sequence
MTPFYESTCN GLDKIAPPSP TTETFAGLFS SEEEINYADL CSFAPTSAVM TAMDSLGDKD 60 DDGTSINSQA EFSAEPAPPL GPLPPQDIII PTDETIHCFP QNIIPAVERT HCFPQDFLTI 120 QSAHTSPQDI TVVGTSSVHG NSAYLRKQRK SDDGYRWIKY GEKPLRGSNN PRSYYKCNHP 180 KCPSRKKVER DFSGNVTHVI YKGTHNHPKP PSPQRIPEYP QVELGEGSSM RDAAAAADDD 240 EINEPTAKRL NGEGKSAAHQ RRITRKPRVV IQTTSDVAVL DDGYRWRKYG EKMVKKNPNP 300 RSYYKCTSYG CMVTKQIERA PDDLRLVLAK YEGRHNHAVP AQRIRVTYPL GRLPVMNNNT 360 SPTAIMPSAT SGHSDPTKLQ TMQNQTPNAN QMQQTQNVGE EHNDNSLFYF DDSFLDNLFK

Sequence ? help Back to Top

Protein Sequence Length: 420 aa Download sequence

MTPFYESTCN GLDKIAPPSP TTETFAGLFS SEEEINYADL CSFAPTSAVM TAMDSLGDKD  60
DDGTSINSQA EFSAEPAPPL GPLPPQDIII PTDETIHCFP QNIIPAVERT HCFPQDFLTI  120
QSAHTSPQDI TVVGTSSVHG NSAYLRKQRK SDDGYRWIKY GEKPLRGSNN PRSYYKCNHP  180
KCPSRKKVER DFSGNVTHVI YKGTHNHPKP PSPQRIPEYP QVELGEGSSM RDAAAAADDD  240
EINEPTAKRL NGEGKSAAHQ RRITRKPRVV IQTTSDVAVL DDGYRWRKYG EKMVKKNPNP  300
RSYYKCTSYG CMVTKQIERA PDDLRLVLAK YEGRHNHAVP AQRIRVTYPL GRLPVMNNNT  360
SPTAIMPSAT SGHSDPTKLQ TMQNQTPNAN QMQQTQNVGE EHNDNSLFYF DDSFLDNLFK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G07100.2	9e-59	WRKY family protein