PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN26458.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family bHLH
Protein Properties Length: 151aa    MW: 17088.8 Da    PI: 9.1486
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN26458.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH231.5e-072361249
                HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHH CS
         HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAve 49
                RRdr+N++f+eL ++l +    +  K +Ka iL  A +
  PIN26458.1  2 RRDRLNDRFQELSSILEPG---RLLKTDKAVILSDAAR 36
                ******************8...89*********99976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 151 aa     Download sequence    
MRRDRLNDRF QELSSILEPG RLLKTDKAVI LSDAARLVIQ FREESQKLKE SCDNLQRKVN  60
ELKTEKNELR DEKLKLKAEK EKLEEQLKAL SPPPGFLVHP PLVHAPFAAP SQVGSSKLVP  120
FVGYPGVPMW QFMPPTAVDT SEDHALRPPV A
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.11e-46bHLH family protein