PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN26504.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family ERF
Protein Properties Length: 128aa    MW: 14281.7 Da    PI: 5.8162
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN26504.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2643.2e-201869256
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56
                +y+GVr ++ +g+++AeIrd s    + +r++lg+f taeeAa+a+++a+ +++g+
  PIN26504.1 18 KYRGVRKRP-WGKYAAEIRDSSR---QgARVWLGTFNTAEEAARAYDKAAYAMRGH 69
                8********.**********422...24**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 128 aa     Download sequence    
MDSTGKSTTG DKDAGEIKYR GVRKRPWGKY AAEIRDSSRQ GARVWLGTFN TAEEAARAYD  60
KAAYAMRGHL AILNFPEEYN LPSSSSHFAS PGSSSTQGRD DVIELEYFDD KLLEELLDSN  120
DPKGKKRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23230.12e-29ERF family protein