PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN26577.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family ERF
Protein Properties Length: 203aa    MW: 21719.9 Da    PI: 4.6568
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN26577.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP248.32.5e-153584155
         AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                + y+G+r ++ +g+Wv+eIr+p++   ++r++lg++ t+e+Aa a++ a + l+g
  PIN26577.1 35 PVYRGIR-CR-SGKWVSEIREPRK---STRIWLGTYPTPEMAAVAYDVASLTLRG 84
                68****9.55.6*********843...5*********************999998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    
MASDGKHDSS SNPLTITPTL EENTPIPSPT SGRHPVYRGI RCRSGKWVSE IREPRKSTRI  60
WLGTYPTPEM AAVAYDVASL TLRGSEAKMN FPDLAQSYPV PASHSAGDIR GAAAAAAATV  120
ASPRSGSGDQ NQAAPPGNGS SSSVHTGGQE FVDEEELFDM PKLLEDMAEG MLVSPPRLKP  180
AADDEESPDN YSRNDSLWNY PSF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.18e-48ERF family protein