PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN26593.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family Trihelix
Protein Properties Length: 325aa    MW: 37462.1 Da    PI: 7.5778
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN26593.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix461.4e-1485148270
    trihelix   2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekk 70 
                 W+++evlaL+++r+ me ++ +       We++s+k+ e g+++s++qCkek+e+ ++ +  +  ++++
  PIN26593.1  85 WSNDEVLALLKLRSTMEIWFPDF-----TWEHISRKLGELGYKKSAEQCKEKFEEESRSFNTVSSNKNN 148
                 ********************998.....9*******************************998877765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 325 aa     Download sequence    
MFDSDQLQYQ FIASRTSSSL PIIPLSFPLS GNPLFDPYSS SSSSSLHTQI IHNTTKNNID  60
DENKVENPIN STSFALQTER SMDPWSNDEV LALLKLRSTM EIWFPDFTWE HISRKLGELG  120
YKKSAEQCKE KFEEESRSFN TVSSNKNNIF SELDELYPAE KTTQHMEKVY KNHVEENPSP  180
KSDEEVIKKP LKSSKKRKRS SSSSSSKDTK LEKFKGFCEA FVKKMMAQQE EMHNKMIEDI  240
LKRDEAKIAR DEAWKNQEKD RIKKEIEVRA SEQENAAKRQ GKIIEFLKKF TCEKDQILAK  300
NVIASNSYTS VCNNRTSSTD VITAH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1195200KKRKRS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28300.16e-25Trihelix family protein