PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN26632.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

MYB

Protein Properties

Length: 218aa MW: 24943.7 Da PI: 7.9137

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN26632.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	33.7	8.2e-11	21	64	3	44
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44 W+ +Ed+ + +a +++ g +W++Ia+ ++ g+++ ++ks++ PIN26632.1 21 TWSRQEDKVFEEALIKFPDGvtdRWRKIAEFLP-GKSPDEVKSHY 64 5******************************.********9 PP
2	Myb_DNA-binding	44.6	3.4e-14	125	169	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT++E+ l++ + +++G+g+W++I+r + +Rt+ q+ s+ qky PIN26632.1 125 PWTEDEHRLFLIGLEKYGKGDWRSISRNIVVTRTPTQVASHAQKY 169 8*******************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 218 aa Download sequence
MYGMDPRDNG WMPTANSTEA TWSRQEDKVF EEALIKFPDG VTDRWRKIAE FLPGKSPDEV 60 KSHYEALEYD IAEIDSGRVE LPNYRDDSAS LGWEGQARSR ASGQISFGSG NRSRHSEVER 120 KKGTPWTEDE HRLFLIGLEK YGKGDWRSIS RNIVVTRTPT QVASHAQKYF LRHNSAKKER 180 KRSSIHDITT AMDSLPVPPP SNLPSQEGFQ NFNFPMPR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04760.1	5e-71	MYB family protein