PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN26669.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family ERF
Protein Properties Length: 149aa    MW: 16126.5 Da    PI: 11.0534
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN26669.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.51.9e-193787255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                +y+GVr ++ +g+++AeIrdp +ng  +r++lg++ tae+Aa a+++a+ +++g
  PIN26669.1 37 HYRGVRKRP-WGKFAAEIRDPAKNG--ARVWLGTYETAEDAALAYDRAAYQMRG 87
                8********.***********9987..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 149 aa     Download sequence    
MAAAPTVVKA EAETLNSPAA EQQKKAAAVS APPRGKHYRG VRKRPWGKFA AEIRDPAKNG  60
ARVWLGTYET AEDAALAYDR AAYQMRGSRA LLNFPLRINS GEPEPVRITS KKSPAYPDRK  120
RKTAAADLVQ SGMRVASGGP KKKRVDSVP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47220.16e-40ERF family protein