PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN26718.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family B3
Protein Properties Length: 295aa    MW: 34540.4 Da    PI: 4.6212
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN26718.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B342.89.4e-1413881290
                HTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
          B3 12 ksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90
                +s +l +p+ f ++++++      ++l+d+  + W++++  r ++   ++ +GW +F ++n L+ g f+vF++ +r+ f
  PIN26718.1 13 TSENLKIPRAFGSQMQEV--LANSVILRDRYKNMWRMEV-ARVGDHDWYFDEGWAKFYEENSLEPGNFLVFEYRDRNLF 88
                456699******999877..6667***************.4555556889**********************9876555 PP
2B346.46.9e-15195277690
                 ..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE CS
          B3   6 tpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sef 90 
                 t+s +++++ l +pkk + ++ ++   +k l l de+gr+W+ k++ ++  gr + t+GWk+ ++ n+++  D+++ +++++ +++
  PIN26718.1 195 TRSRTSRKNELHIPKKVIVDYHLE--IPKNLFLIDEKGRKWKTKIKEWRD-GRLWCTRGWKSLCNINNIDKDDVCICEFVQEeDSE 277
                 5678889999***********887..7778***************77776.589************************88653333 PP
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    
MDSRPGFFKR ISTSENLKIP RAFGSQMQEV LANSVILRDR YKNMWRMEVA RVGDHDWYFD  60
EGWAKFYEEN SLEPGNFLVF EYRDRNLFDF KLLGSDGCEK KGVGVLKFSF NEERNGDGDD  120
NDNDSDDDDD ENDDDESEEE QDEEEEQINT SITFGSGIIP SKRRYRKRNI CCDCYGADIF  180
ESGLVPRPKH PYFVTRSRTS RKNELHIPKK VIVDYHLEIP KNLFLIDEKG RKWKTKIKEW  240
RDGRLWCTRG WKSLCNINNI DKDDVCICEF VQEEDSEDVQ IVVHVLDIAG KQGLG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06160.15e-12B3 family protein