PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN26724.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family B3
Protein Properties Length: 266aa    MW: 30146.2 Da    PI: 6.8947
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN26724.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3536.4e-17156256199
                 EEEE-..-HH.HHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTE..EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
          B3   1 ffkvltpsdv.lksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgr..yvltkGWkeFvkangLkegDfvvFkldgrsefel 92 
                 f+k+l+ sd+ lk++rl++pk++ae++    +     +  ++++d++g++We+ ++y+ ++g+  yvl+ G +++  +++ + gD+v+F+++  + +e 
  PIN26724.1 156 FEKILSASDAdLKLARLIIPKRCAEAFfpdlS--GLHGLHIKMQDTEGNEWEFHYRYWINGGSriYVLE-GLRDYMVSKQWQPGDTVTFYRV--EPGEK 249
                 89999999972466***************652..445678*****************776666668888.********************54..55555 PP

                 EEEEE-S CS
          B3  93 vvkvfrk 99 
                 vv+ +rk
  PIN26724.1 250 VVMGLRK 256
                 6665554 PP
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    
MASSSGMSCF QCQGSSSKPG HFRNGWRLHS GQYAQLCPRC ASVYEEGRFC ETFHSNDDGW  60
RDCESCGKLV HCGCIVSFNT HLLLDFGGII CMECSRFNFL LARNRCLSLE PEIRDGESYQ  120
EASGQAAVEA QYWSRVTDLE LQQVSRNPKS TVTPLFEKIL SASDADLKLA RLIIPKRCAE  180
AFFPDLSGLH GLHIKMQDTE GNEWEFHYRY WINGGSRIYV LEGLRDYMVS KQWQPGDTVT  240
FYRVEPGEKV VMGLRKTSAS PQLPRI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G30470.14e-42B3 family protein