PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN26777.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

MYB

Protein Properties

Length: 219aa MW: 24708.7 Da PI: 9.5746

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN26777.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50	7e-16	15	61	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 g+WT++Ed++l++ +k +G g+W+ ++ g+ R++k+c++rw++yl PIN26777.1 15 GAWTKQEDDKLIHHIKIHGEGSWSNLPKAAGLQRCGKSCRLRWLNYL 61 89*******************************************97 PP
2	Myb_DNA-binding	48	2.9e-15	68	111	2	47
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 g+++ E++ll++++++lG++ W++Ia +++ gRt++++k++w+++ PIN26777.1 68 GNFSIAEEDLLIKLHALLGNR-WSLIAGRLP-GRTDNEVKDYWNSH 111 688999*************.*****.*********987 PP

Sequence ? help Back to Top
Protein Sequence Length: 219 aa Download sequence
MRNPCSEEKR RIKTGAWTKQ EDDKLIHHIK IHGEGSWSNL PKAAGLQRCG KSCRLRWLNY 60 LRPDSKGGNF SIAEEDLLIK LHALLGNRWS LIAGRLPGRT DNEVKDYWNS HIKRKLTNMG 120 IDPNNHRVDQ TLLSSCSKIS KDDAKLSHVS RINPSKNLSK HRSINDCDQT SDSTSSINGE 180 DEEVSSSDLN LDLTIRFPPS SFSSSSGSRF KVVENRVDI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G22640.1	1e-67	MYB family protein