PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN26811.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

FAR1

Protein Properties

Length: 660aa MW: 76157.3 Da PI: 8.223

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN26811.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	60.4	5.4e-19	38	126	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 fY +Y++++GF++r+ ++k+ ++g + +r++vCs g+ ++++ + +rr + r+gCka++++++++ dg ++vtk+ +HnH+la PIN26811.1 38 FYFNYGRDLGFDIRRYSKKTD-KDGVVRNREWVCSFAGFYLSSNEGYVCRRRATLDLRCGCKACFRISRDRtDGLYKVTKFIPHHNHPLA 126 9************986665.9999*************9999******************999**************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 660 aa Download sequence
MVNSSSKDNE ITSPSKDNVV DSRVLQLVLK TDEEADLFYF NYGRDLGFDI RRYSKKTDKD 60 GVVRNREWVC SFAGFYLSSN EGYVCRRRAT LDLRCGCKAC FRISRDRTDG LYKVTKFIPH 120 HNHPLATDEI AHLLKCNRYI SIPHKTLLSG LTGSGIRACK AMNYLAHIEG GPGKLPFKRK 180 DDLQIHDKDL IFDFTLDDEN TLSRLFWIDG MSCAQFKLFG DVLLFDSTYK TNPYQFPLVM 240 LFGVNNHFKT CVFGAAILCD ETVESYCWLL QQFKQADAAM RAAIKFEYPK AKHRICSWNL 300 EHNALRNVGK CQFVADFGDL ITANYNVEDF EIAWQNLIQK HDVANHPWVL DVYKDKECWS 360 GAYCRGYFMA MMTSTQYKPC LKSEVLKSFE NHAATVYTRK IFEKVQDEIV AEQGLILQEA 420 INEDDTIFTF KFVPYLNHVV NICCLMINWP EGTFECQCLM LKLDGIPCRH IISALKNLQQ 480 IELPDPIIKY RWTVDIGVKL RKEFRFPFPF EDPQRRRYAQ LHKECVELCL LSSQTKEATT 540 NTINMLNSLV DSIQPHKMNG CSTNKNEEMN HKKGNGGKKP ENFTSTFVIC DPKRKHSRGA 600 VREKKQHCSS CGQPEHNVNT CKEDPNTLTF QLRKLKLVRG FRETQSITLT PRSNEFSFTS

Sequence ? help Back to Top

Protein Sequence Length: 660 aa Download sequence

MVNSSSKDNE ITSPSKDNVV DSRVLQLVLK TDEEADLFYF NYGRDLGFDI RRYSKKTDKD  60
GVVRNREWVC SFAGFYLSSN EGYVCRRRAT LDLRCGCKAC FRISRDRTDG LYKVTKFIPH  120
HNHPLATDEI AHLLKCNRYI SIPHKTLLSG LTGSGIRACK AMNYLAHIEG GPGKLPFKRK  180
DDLQIHDKDL IFDFTLDDEN TLSRLFWIDG MSCAQFKLFG DVLLFDSTYK TNPYQFPLVM  240
LFGVNNHFKT CVFGAAILCD ETVESYCWLL QQFKQADAAM RAAIKFEYPK AKHRICSWNL  300
EHNALRNVGK CQFVADFGDL ITANYNVEDF EIAWQNLIQK HDVANHPWVL DVYKDKECWS  360
GAYCRGYFMA MMTSTQYKPC LKSEVLKSFE NHAATVYTRK IFEKVQDEIV AEQGLILQEA  420
INEDDTIFTF KFVPYLNHVV NICCLMINWP EGTFECQCLM LKLDGIPCRH IISALKNLQQ  480
IELPDPIIKY RWTVDIGVKL RKEFRFPFPF EDPQRRRYAQ LHKECVELCL LSSQTKEATT  540
NTINMLNSLV DSIQPHKMNG CSTNKNEEMN HKKGNGGKKP ENFTSTFVIC DPKRKHSRGA  600
VREKKQHCSS CGQPEHNVNT CKEDPNTLTF QLRKLKLVRG FRETQSITLT PRSNEFSFTS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-58	FAR1 family protein