PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN26821.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family LBD
Protein Properties Length: 151aa    MW: 17582.4 Da    PI: 9.515
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN26821.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26052.91.1e-1678518100
      DUF260  18 lapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100
                 ++p++  ++++k + vhk+F+a+nv+k+l+++pee+red+++sl+yeAe++++d    ++g i +lq++l +l+++l l++++
  PIN26821.1   7 IRPILQIRRAQKVRKVHKVFRANNVSKILNKVPEEQREDTINSLIYEAEVQLQD----CIGEIASLQHNLVELQHDLILAQAR 85 
                 688888899******************************************998....9****************99988865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 151 aa     Download sequence    
MHPKLPIRPI LQIRRAQKVR KVHKVFRANN VSKILNKVPE EQREDTINSL IYEAEVQLQD  60
CIGEIASLQH NLVELQHDLI LAQARLACYL EQILFNFENF TNAASELHLL LYNKQERPLR  120
TMEQVNLRIQ HLEAKISKIK TYKSSTSSLA C
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G11090.13e-26LBD family protein