PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN26852.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

DBB

Protein Properties

Length: 180aa MW: 19938.7 Da PI: 7.1424

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN26852.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	25.6	2.6e-08	4	33	5	34
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeH 34 C+ +e+ ++ lfC ++ lC+ C ++ H PIN26852.1 4 LCDACESAPAVLFCAADEAALCRACDEKVH 33 7**************************998 PP
2	zf-B_box	29	2.3e-09	54	92	4	38
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg....Ht 38 ++C+ +e+ ++ ++Ce +++ lC +C + H g H+ PIN26852.1 54 PRCDICENAPAFFYCEVDGSSLCLQCDMIVHVGgkrtHR 92 89**************************99966666776 PP

Sequence ? help Back to Top
Protein Sequence Length: 180 aa Download sequence
MRTLCDACES APAVLFCAAD EAALCRACDE KVHMCNKLAG RHIRVGLANP IDVPRCDICE 60 NAPAFFYCEV DGSSLCLQCD MIVHVGGKRT HRRYLLLRQR VEFPGDRSSP TGDPATKAPV 120 PAENKREYSK SDKPMVEDDQ KNHTVSPSAN LDANADRPIK IDLNMKPHRV HGHTSNNQEL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38960.1	1e-71	DBB family protein