PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN26880.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

WRKY

Protein Properties

Length: 223aa MW: 25814.4 Da PI: 8.7175

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN26880.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	101.6	4.7e-32	146	204	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vk++ +prsYYrCt+ +C+vkk+ver aedp++v++tYeg+H h+ PIN26880.1 146 LDDGYKWRKYGQKVVKDTLHPRSYYRCTQDNCRVKKRVERLAEDPRMVITTYEGRHIHS 204 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 223 aa Download sequence
MSSASESMIN QSLLEDQEMF GIFPFHTNFT PLPLGCNNQP FKTLANINPS SLTPDLPLSL 60 FDHHHSLAPK QKELDFPAHF PGSQILSLQK STPNYWAFGD LSDCMNMKRS GDHLGVSPMK 120 MKKIKARRKM REPRFCFKTM SDVDVLDDGY KWRKYGQKVV KDTLHPRSYY RCTQDNCRVK 180 KRVERLAEDP RMVITTYEGR HIHSPSHDDE DSQASAQLNN FFW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G39410.1	9e-51	WRKY family protein