PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN26888.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

Protein Properties

Length: 685aa MW: 75834.5 Da PI: 5.4099

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN26888.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	63.8	2.7e-20	548	645	2	96
EEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEE.TTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EE CS B3 2 fkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltled.esgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvv 94 +kvl++sdv+++gr+vlpkk ae+h +++++ ++ + +ed ++r+W++++++ ++ks++y+l+ ++ +Fv+ ngL+egDf+v++ ++ +++++++ PIN26888.1 548 QKVLKQSDVGNLGRIVLPKKEAESHlpELESRDGISIAMEDiGTSRVWNMRYRFwpNNKSRMYLLE-NTGDFVRVNGLQEGDFIVIY--SDtKCGKYMI 643 79***********************999999****7778***99777777777777.******************..4449998887 PP EE CS B3 95 kv 96 + PIN26888.1 644 RG 645 65 PP

Sequence ? help Back to Top
Protein Sequence Length: 685 aa Download sequence
MIKDESVEQD LHITAGNVGA DDGVIANLTG FDPMEEDHQV TWLDRNQENL LDVNDASIFY 60 NDFPPLPDFP CMSSSSSSSS TPAASKPLAP TSSSSSAASS SPAVSWAMMK SDDKVKVEPA 120 ALSSTASMEI PPLSDQDCLG DVDCIDVMEN FGYMDLIDSN ELWDPSSVFQ SDNPQESFLE 180 DQQLAAAAAM EGSQQDQKVQ PPPQEEENGF TNFLQGNSEL AMIFFEWLKQ NRDCISAEDM 240 RSIKLKRSTI ESASKRLGST KEGKKQLLKL ILEWVEQYQL QKKRMSEGGP QSPFALQDSV 300 QNPDPNTNPN PNPNPNFMSY NPWVPSAPSH ASEATAAMVA APPAFPAPMA GYNCDPYANP 360 IPVGPVNHPV VNGIPYPVME HAQSWAVPQF PMPQSQFGPF PDNGNVIGHQ QAFYGNPYQI 420 FDPNGDRLMR LGSSATKEAR KKRMARQRRL YSHHHRHNSN SNQHQNQMND HRGVGDDVDD 480 GDQGNWVYWS AGGLSPPTAG NVPPADASQP HSGDRALVQA QNYQRQASSD RRQQQGWKTE 540 KNLKFLLQKV LKQSDVGNLG RIVLPKKEAE SHLPELESRD GISIAMEDIG TSRVWNMRYR 600 FWPNNKSRMY LLENTGDFVR VNGLQEGDFI VIYSDTKCGK YMIRGVKVRQ PGAKLEGKKP 660 ARRNIRNLSL AGSTSSLAPI KQAVR

Sequence ? help Back to Top

Protein Sequence Length: 685 aa Download sequence

MIKDESVEQD LHITAGNVGA DDGVIANLTG FDPMEEDHQV TWLDRNQENL LDVNDASIFY  60
NDFPPLPDFP CMSSSSSSSS TPAASKPLAP TSSSSSAASS SPAVSWAMMK SDDKVKVEPA  120
ALSSTASMEI PPLSDQDCLG DVDCIDVMEN FGYMDLIDSN ELWDPSSVFQ SDNPQESFLE  180
DQQLAAAAAM EGSQQDQKVQ PPPQEEENGF TNFLQGNSEL AMIFFEWLKQ NRDCISAEDM  240
RSIKLKRSTI ESASKRLGST KEGKKQLLKL ILEWVEQYQL QKKRMSEGGP QSPFALQDSV  300
QNPDPNTNPN PNPNPNFMSY NPWVPSAPSH ASEATAAMVA APPAFPAPMA GYNCDPYANP  360
IPVGPVNHPV VNGIPYPVME HAQSWAVPQF PMPQSQFGPF PDNGNVIGHQ QAFYGNPYQI  420
FDPNGDRLMR LGSSATKEAR KKRMARQRRL YSHHHRHNSN SNQHQNQMND HRGVGDDVDD  480
GDQGNWVYWS AGGLSPPTAG NVPPADASQP HSGDRALVQA QNYQRQASSD RRQQQGWKTE  540
KNLKFLLQKV LKQSDVGNLG RIVLPKKEAE SHLPELESRD GISIAMEDIG TSRVWNMRYR  600
FWPNNKSRMY LLENTGDFVR VNGLQEGDFI VIYSDTKCGK YMIRGVKVRQ PGAKLEGKKP  660
ARRNIRNLSL AGSTSSLAPI KQAVR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24650.1	9e-85	B3 family protein