PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN26946.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

C2H2

Protein Properties

Length: 368aa MW: 42240.9 Da PI: 6.6731

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN26946.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.4	0.00099	79	101	3	23
ET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 3 Cp..dCgksFsrksnLkrHirtH 23 C+ Cgk+F + L++H H PIN26946.1 79 CSyeGCGKTFFDAGALRKHSHIH 101 77779**************7766 PP
2	zf-C2H2	16	3.6e-05	106	130	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y+C+ +Cgk F ++s LkrH H PIN26946.1 106 YVCHyeNCGKKFLDSSKLKRHFLIH 130 9********************8877 PP
3	zf-C2H2	21.7	5.2e-07	136	160	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 ++Cp Cgk Fs nL++H++tH PIN26946.1 136 FVCPheGCGKAFSLDFNLRSHMKTH 160 89**********************9 PP
4	zf-C2H2	17.8	9.2e-06	166	190	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 + Cp dCgk++ + + Lk+Hi +H PIN26946.1 166 HICPypDCGKRYAHEYKLKNHIASH 190 679999*****************96 PP
5	zf-C2H2	13.2	0.00027	227	252	1	23
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 y Cp C k + + + L+ H+r+ H PIN26946.1 227 YACPyeGCEKAYIHEYKLNLHLRReH 252 89*********************999 PP

Sequence ? help Back to Top
Protein Sequence Length: 368 aa Download sequence
METHITHTFF DRRPITKSRT PAVKWVKEWV PQDLVTTGGK CYVLKWVNEA TLKAMKEKSK 60 EPEVVEPEPE PTTEVLFLCS YEGCGKTFFD AGALRKHSHI HGERQYVCHY ENCGKKFLDS 120 SKLKRHFLIH TGERDFVCPH EGCGKAFSLD FNLRSHMKTH SQENYHICPY PDCGKRYAHE 180 YKLKNHIASH HEKNVIDAPK YTLPEKPVKA QKSSGGPSGG PSSDRPYACP YEGCEKAYIH 240 EYKLNLHLRR EHPGHFPDEN AKNNNENEVD EGSDQDPYAG KRGKVQKQTR PKPNLKLPPS 300 KVPQRKSSAA TASPANLNVA KKAWPPKEEI TYEEEDSEET EEERDNVGDG WRYGENNEED 360 DEETEYED

Sequence ? help Back to Top

Protein Sequence Length: 368 aa Download sequence

METHITHTFF DRRPITKSRT PAVKWVKEWV PQDLVTTGGK CYVLKWVNEA TLKAMKEKSK  60
EPEVVEPEPE PTTEVLFLCS YEGCGKTFFD AGALRKHSHI HGERQYVCHY ENCGKKFLDS  120
SKLKRHFLIH TGERDFVCPH EGCGKAFSLD FNLRSHMKTH SQENYHICPY PDCGKRYAHE  180
YKLKNHIASH HEKNVIDAPK YTLPEKPVKA QKSSGGPSGG PSSDRPYACP YEGCEKAYIH  240
EYKLNLHLRR EHPGHFPDEN AKNNNENEVD EGSDQDPYAG KRGKVQKQTR PKPNLKLPPS  300
KVPQRKSSAA TASPANLNVA KKAWPPKEEI TYEEEDSEET EEERDNVGDG WRYGENNEED  360
DEETEYED

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G06634.1	1e-145	C2H2 family protein