PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN26997.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family NF-YB
Protein Properties Length: 140aa    MW: 15683.5 Da    PI: 6.2663
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN26997.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB146.27.2e-46398297
       NF-YB  2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97
                 e+d++lPianv+rimk++lP nakisk+ake +qec+sefisfvtseasd+c++e+rkt+ngdd++ al+++G+++y e++  yl+k re e++k
  PIN26997.1  3 DEHDNLLPIANVGRIMKQILPPNAKISKEAKERMQECASEFISFVTSEASDRCHKENRKTVNGDDICRALSSVGLDNYSEAMLRYLQKLRESERQK 98
                589*****************************************************************************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 140 aa     Download sequence    
MTDEHDNLLP IANVGRIMKQ ILPPNAKISK EAKERMQECA SEFISFVTSE ASDRCHKENR  60
KTVNGDDICR ALSSVGLDNY SEAMLRYLQK LRESERQKAN QINYKVSSSE DKDEASTTNS  120
APFHFGILER GGSISSDKPS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G09030.14e-51NF-YB family protein