PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN27074.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

FAR1

Protein Properties

Length: 356aa MW: 40264.7 Da PI: 7.0428

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN27074.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	37.2	9.4e-12	2	58	33	89
FAR1 33 fvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 + C +eg +++++ +++ ++ +a++r+gC aklk++++k++ w v+ ++ +HnH+l PIN27074.1 2 LLCACEGVKDDTHFTKKIAEYYKASSRCGCSAKLKISRSKEESWTVAIFDAKHNHDL 58 57********999888999********************************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 356 aa Download sequence
MLLCACEGVK DDTHFTKKIA EYYKASSRCG CSAKLKISRS KEESWTVAIF DAKHNHDLYA 60 PNEAYLLRSQ RNMTEEQRIL FNTTCNSDVH LNLEGGEHNL GFTQSKAFNE LAHQKRKKKI 120 DSGDVVGLVQ HFKNKSNNEN NFYWNMEVES DIILINIFFR DSQCFVDYES SGDVLSFDTT 180 YKTNNEGTNT NLKKEIGNAT SSLLDCVHGY EKVLSNWHSE EKKKIFIVII LSLHYKISCR 240 TTKGPRQGGR SSQTHGNECP SQQDMFLNSQ LGANDQPQWI DPIHFSHGIT NFQTCQLSAN 300 QASWSPFNSF AVTNLGTHDI GSQFNISLHA TGNNPSNDLS QNAQAFSNYF RGPPFN

Sequence ? help Back to Top

Protein Sequence Length: 356 aa Download sequence

MLLCACEGVK DDTHFTKKIA EYYKASSRCG CSAKLKISRS KEESWTVAIF DAKHNHDLYA  60
PNEAYLLRSQ RNMTEEQRIL FNTTCNSDVH LNLEGGEHNL GFTQSKAFNE LAHQKRKKKI  120
DSGDVVGLVQ HFKNKSNNEN NFYWNMEVES DIILINIFFR DSQCFVDYES SGDVLSFDTT  180
YKTNNEGTNT NLKKEIGNAT SSLLDCVHGY EKVLSNWHSE EKKKIFIVII LSLHYKISCR  240
TTKGPRQGGR SSQTHGNECP SQQDMFLNSQ LGANDQPQWI DPIHFSHGIT NFQTCQLSAN  300
QASWSPFNSF AVTNLGTHDI GSQFNISLHA TGNNPSNDLS QNAQAFSNYF RGPPFN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	3e-18	FAR1 family protein