PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN27126.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family WRKY
Protein Properties Length: 351aa    MW: 37917.3 Da    PI: 5.0447
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN27126.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY841.5e-26135196159
                 ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                 ldDgy+WrKYGqK++ g+++pr+YYrCt++   gC ++k v+rs+edp++ eitY+ +H+++
  PIN27126.1 135 LDDGYSWRKYGQKDILGAKYPRGYYRCTHRhgqGCLATKYVQRSDEDPNTYEITYRRTHTCN 196
                 59***************************99999**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 351 aa     Download sequence    
MENFPANGDM KNLVKELSEG RELAAQLQGH LNGQSSNSHQ MREFLLHKIL NSYDQALAVL  60
KHGHAGTSGG GGGEAAAPGA TAVGTSESPR SLVGSPPTDD SDQDFKDQAS RKRKVVPSST  120
EKVKVNPATG IEGQLDDGYS WRKYGQKDIL GAKYPRGYYR CTHRHGQGCL ATKYVQRSDE  180
DPNTYEITYR RTHTCNPRTN ANNPPVSTLD PQNENPNPLP RSEQNQPPLN IQTSLGIITQ  240
DLGPSENPPL DPFINFPSSS RLINPQNSDN DNLVSNLEDY SNYFSILTDI SNDNYGGLVS  300
DLQINSESEL SPVVAAVTSS SNSPTVGTSL PFGSSGSGSD FGFGDPGHYY N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G24110.11e-43WRKY family protein