PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN27174.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family MYB
Protein Properties Length: 287aa    MW: 32595.5 Da    PI: 5.4539
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN27174.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding48.52.1e-151966148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g W++eEde+l ++    G g+W+ Iar  g+ R++k+c++rw +yl
       PIN27174.1 19 KGLWSPEEDEKLMRYMLTNGQGCWSDIARNAGLQRCGKSCRLRWINYL 66
                     678*******************************************97 PP
2Myb_DNA-binding52.41.2e-1672115146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg+++++E+e++v+++  lG++ W+ Ia++++ gRt++++k++w++
       PIN27174.1  72 RGAFSPQEEEIIVHLHSILGNR-WSQIAARLP-GRTDNEIKNFWNS 115
                      89********************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    
MRKPDKKKDN LNNKVKLRKG LWSPEEDEKL MRYMLTNGQG CWSDIARNAG LQRCGKSCRL  60
RWINYLRPDL KRGAFSPQEE EIIVHLHSIL GNRWSQIAAR LPGRTDNEIK NFWNSTIKKM  120
LKNNKSPTKI TNHSYNIPTN NNPSSELEGI NTTFMQENDI VCMDSSNFSN PFNPTADYNS  180
NIFDVSNMAS ADSLMFRDVM GLENDISIPG LEVIRGADGD NCGVYNEYVL DKKNGGLNIN  240
NSSSESINVG VGNHSWQEES FKMGEYLDWE GLLDNVSSLP YLDIQVE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12870.12e-66MYB family protein